Logo image
WorfDB: the Caenorhabditis elegans ORFeome Database
Article de revue scientifique   Avec comité de lecture

WorfDB: the Caenorhabditis elegans ORFeome Database

Philippe Vaglio, Philippe Lamesch, Jérôme Reboul, Jean-François Rual, Monica Martinez, David Hill et Marc Vidal
Nucleic acids research, Vol.31(1), p.237-240
01/01/2003
PMID: 12519990

Résumé

WorfDB (Worm ORFeome DataBase; http://worfdb.dfci.harvard.edu) was created to integrate and disseminate the data from the cloning of complete set of ∼19 000 predicted protein-encoding Open Reading Frames (ORFs) of Caenorhabditis elegans (also referred to as the ‘worm ORFeome’). WorfDB serves as a central data repository enabling the scientific community to search for availability and quality of cloned ORFs. So far, ORF sequence tags (OSTs) obtained for all individual clones have allowed exon structure corrections for ∼3400 ORFs originally predicted by the C. elegans sequencing consortium. In addition, we now have OSTs for ∼4300 predicted genes for which no ESTs were available. The database contains this OST information along with data pertinent to the cloning process. WorfDB could serve as a model database for other metazoan ORFeome cloning projects.

Indicateurs

1 Consultations de la notice

Détails

Logo image