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The High-salt Recovered Sequence-sequencing (HRS-seq) method: exploring genome association with nuclear bodies
Article de revue   Open Access

The High-salt Recovered Sequence-sequencing (HRS-seq) method: exploring genome association with nuclear bodies

Cosette Rebouissou, Marie-Odile Baudement et Thierry Forné
Methods in Molecular Biology, Vol.2532, pp.187-197
Spatial Genome Organization: Methods and Protocols
23/07/2022
PMID: 35867250

Résumé

Quantitative PCR nuclear bodies High-order chromatin organization Nuclear Bodies / Chromatin / genetics
Recent works indicate that, at specific loci, interactions of chromatin with membrane-less organelles self-assembled through mechanisms of phase separation, like nuclear bodies, are crucial to regulate genome functions, and in particular transcription. Here we describe the protocol of the High-salt Recovered Sequence sequencing method whose principle relies on high-throughput sequencing of genomic DNA trapped into large RNP complexes that are made insoluble by high-salt treatments.

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