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Redundancy analysis, genome-wide association studies, and the pigmentation of brown trout (Salmo trutta L.)
Article de revue   Open Access   Avec comité de lecture

Redundancy analysis, genome-wide association studies, and the pigmentation of brown trout (Salmo trutta L.)

Théo Valette, Maëva Leitwein, Jean‐marc Lascaux, Erick Desmarais, Patrick Berrebi et Bruno Guinand
Journal of Fish Biology, Vol.102(1), pp.96-118
01/2023

Résumé

salmonid multi-trait phenotype melanocytes linkage disequilibrium genetic drift admixture ancestry
Pigmentation variation in the polytypic brown trout (Salmo trutta) has an unknown genomic basis. Using redundancy analyses and genome-wide association studies, authors showed that pigmentation has a large polygenic basis in this species, based on hundreds of loci known to be associated to colour. Redundancy analysis also showed that backcrossed wild trout converged to a locally adaptive Mediterranean pigmentation pattern despite the release of Atlantic hatchery fish.

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