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Chado controller: advanced annotation management with a community annotation system
Article de revue   Avec comité de lecture

Chado controller: advanced annotation management with a community annotation system

Valention Guignon, Gaëtan Droc, Michael Alaux, Franc-Christophe Baurens, Olivier Garsmeur, Claire Poiron, Tim Carver, Mathieu Rouard et Stephanie Bocs
Bioinformatics (Oxford, England), Vol.28(7), pp.1054-1056
01/04/2012
PMID: 22285827

Résumé

Life Sciences Vegetal Biology
We developed a controller that is compliant with the Chado database schema, GBrowse and genome annotation-editing tools such as Artemis and Apollo. It enables the management of public and private data, monitors manual annotation ( with controlled vocabularies, structural and functional annotation controls) and stores versions of annotation for all modified features. The Chado controller uses PostgreSQL and Perl.

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