Broad-scale adaptive genetic variation in alpine plants is driven by temperature and precipitation

Stephanie Manel; Felix Gugerli; Wilfried Thuiller; Nadir Alvarez; Pierre Legendre; Rolf Holderegger; Ludovic Gielly; Pierre Taberlet; Wolfgang Ahlmer; Paolo Ajmone Marsan; Enzo Bona; Maurizio Bovio; Elzbieta Cieslak; Gheorghe Coldea; Licia Colli; Vasile Cristea; Jean-Pierre Dalmas; Thorsten Englisch; Luc Garraud; Myriam Gaudeul; Walter Gutermann; Nejc Jogan; Alexander A. Kagalo; Grazyna Korbecka; Philippe Kupfer; Benoît Lequette; Dominik Roman Letz; Guilhem Mansion; Karol Marhold; Fabrizio Martini; Zbigniew Mirek; Riccardo Negrini; Harald Niklfeld; Fernando Nino; Massimiliano Patrini; Ovidiu Paun; Marco Pellecchia; Giovanni Perico; Halina Piekos-Mirkowa; Peter Poschlod; Filippo Prosser; Mihai Puscas; Michal Ronikier; Patrizia Rossi; Martin Scheuerer; Gerald Schneeweiss; Peter Schonswetter; Luise Schratt-Ehrendorfer; Fanny Schupfer; Alberto Selvagg; Katharina Steinmann; Conny Thiel-Egenter; Andreas Tribsch; Marcela Van Loo; Manuela Winkler; Thomas Wohlgemuth; Tone Wraber; Niklaus Zimmermann; Gabriel Alziar; Carlo Argenti; Tinka Bacic; Jean-Eric Berthouse; Alessio Bertolli; Enrico Bressan; Francois Breton; Massimo Buccheri; Sonia D'Andrea; Sergio Danieli; Rosanna De Mattei; Thierry Delahaye; Roberto Della Vedova; Cedric Dentant; Alessandra Di Turi; Wolfgang Diewald; Rolland Douzet; Constantin Dragulescu; Philippe Druart; Siegrun Ertl; Delphine Fallour-Rubio; Gino Fantini; Paolo Fantini; Germano Federici; Franco Fenaroli; Viera Ferakova; Roberto Ferranti; Francesco Festii; Bozo Frajman; Jean-Claude Gachet; Bruno Gallino; Federica Gironi; Gheorghe Groza; Andreas Hilpold; Catherine Jollibert; Denis Jordan; Thomas Kiebacher; Michael Kleih; Michel Lambertini; Cesare Lasen; Petra Mair; Luca Mangili; IntraBioDiv Consortium

doi:10.1111/j.1365-294X.2012.05656.x

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Broad-scale adaptive genetic variation in alpine plants is driven by temperature and precipitation

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Broad-scale adaptive genetic variation in alpine plants is driven by temperature and precipitation

Stephanie Manel, Felix Gugerli, Wilfried Thuiller, Nadir Alvarez, Pierre Legendre, Rolf Holderegger, Ludovic Gielly, Pierre Taberlet, Wolfgang Ahlmer, Paolo Ajmone Marsan, …

Molecular ecology, Vol.21(15), pp.3729-3738

08/2012

DOI: https://doi.org/10.1111/j.1365-294X.2012.05656.x

PMID: 22680783

Résumé

Biochemistry & Molecular Biology

Ecology

Environmental Sciences & Ecology

Evolutionary Biology

Life Sciences & Biomedicine

Science & Technology

Identifying adaptive genetic variation is a challenging task, in particular in non-model species for which genomic information is still limited or absent. Here, we studied distribution patterns of amplified fragment length polymorphisms (AFLPs) in response to environmental variation, in 13 alpine plant species consistently sampled across the entire European Alps. Multiple linear regressions were performed between AFLP allele frequencies per site as dependent variables and two categories of independent variables, namely Morans eigenvector map MEM variables (to account for spatial and unaccounted environmental variation, and historical demographic processes) and environmental variables. These associations allowed the identification of 153 loci of ecological relevance. Univariate regressions between allele frequency and each environmental factor further showed that loci of ecological relevance were mainly correlated with MEM variables. We found that precipitation and temperature were the best environmental predictors, whereas topographic factors were rarely involved in environmental associations. Climatic factors, subject to rapid variation as a result of the current global warming, are known to strongly influence the fate of alpine plants. Our study shows, for the first time for a large number of species, that the same environmental variables are drivers of plant adaptation at the scale of a whole biome, here the European Alps.

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Titre: Broad-scale adaptive genetic variation in alpine plants is driven by temperature and precipitation
Créateurs - sans rôle: Stephanie Manel - Aix Marseille Univ, Lab Populat Environm Dev, UMR UP IRD 151, 3 Pl Victor Hugo, F-13331 Marseille 03, France
Felix Gugerli - WSL Swiss Fed Res Inst, CH-8903 Birmensdorf, Switzerland
Wilfried Thuiller - Laboratoire d'Écologie Alpine
Nadir Alvarez - University of Lausanne
Pierre Legendre - Univ Montreal, Dept Sci Biol, Montreal, PQ H3C 3J7, Canada
Rolf Holderegger - WSL Swiss Fed Res Inst, CH-8903 Birmensdorf, Switzerland
Ludovic Gielly - Univ Grenoble 1, Lab Ecol Alpine LECA, CNRS UMR 5553, F-38041 Grenoble 9, France
Pierre Taberlet - Univ Grenoble 1, Lab Ecol Alpine LECA, CNRS UMR 5553, F-38041 Grenoble 9, France
Wolfgang Ahlmer - Univ Regensburg, Inst Bot, D-93040 Regensburg, Germany
Paolo Ajmone Marsan - Univ Cattolica Sacro Cuore, Ist Zootecn, Via E Parmense 84, I-29122 Piacenza, Italy
Enzo Bona - Univ Trieste, Dipartimento Biol, Via L Giorgieri 10, I-34127 Trieste, Italy
Maurizio Bovio - Univ Trieste, Dipartimento Biol, Via L Giorgieri 10, I-34127 Trieste, Italy
Elzbieta Cieslak - Polish Acad Sci, Inst Bot, Lubics 46, PL-31512 Krakow, Poland
Gheorghe Coldea - Inst Cercetari Biol, Str Republicii 48, Cluj Napoca 400015, Romania
Licia Colli - Univ Cattolica Sacro Cuore, Ist Zootecn, Via E Parmense 84, I-29122 Piacenza, Italy
Vasile Cristea - Inst Cercetari Biol, Str Republicii 48, Cluj Napoca 400015, Romania
Jean-Pierre Dalmas - Conservat Bot Natl Alpin CBNA, Domaine de Charance, F-05000 Gap, France
Thorsten Englisch - Univ Vienna, Inst Bot, Dept Biogeog, Rennweg 14, A-1030 Vienna, Austria
Luc Garraud - Conservat Bot Natl Alpin CBNA, Domaine de Charance, F-05000 Gap, France
Myriam Gaudeul - Laboratoire d'Écologie Alpine
Walter Gutermann - Univ Vienna, Inst Bot, Dept Biogeog, Rennweg 14, A-1030 Vienna, Austria
Nejc Jogan - Univ Ljubljani, Oddelek Biol BF, Vecna Pot 111, SI-1000 Ljubljana, Slovenia
Alexander A. Kagalo - Inst Ecol Carpathians NAS Ukraine, 4 Kozelnitska Str, Lvov 79026, Ukraine
Grazyna Korbecka - Polish Acad Sci, Inst Bot, Lubics 46, PL-31512 Krakow, Poland
Philippe Kupfer - Univ Neuchatel, Lab Bot Evolut, 11 Rue Emile Argand, CH-2007 Neuchatel, Switzerland
Benoît Lequette - Parc Natl Mercantour, 23 Rue Italie, BP 1316, F-06006 Nice 1, France
Dominik Roman Letz - Slovak Acad Sci, Inst Bot, Dept Vasc Plant Taxon, Dubravska Cesta 14, Bratislava SK-84523, Slovakia
Guilhem Mansion - Univ Neuchatel, Lab Bot Evolut, 11 Rue Emile Argand, CH-2007 Neuchatel, Switzerland
Karol Marhold - Slovak Acad Sci, Inst Bot, Dept Vasc Plant Taxon, Dubravska Cesta 14, Bratislava SK-84523, Slovakia
Fabrizio Martini - Univ Trieste, Dipartimento Biol, Via L Giorgieri 10, I-34127 Trieste, Italy
Zbigniew Mirek - Polish Acad Sci, Inst Bot, Lubics 46, PL-31512 Krakow, Poland
Riccardo Negrini - Univ Cattolica Sacro Cuore, Ist Zootecn, Via E Parmense 84, I-29122 Piacenza, Italy
Harald Niklfeld - Univ Vienna, Inst Bot, Dept Biogeog, Rennweg 14, A-1030 Vienna, Austria
Fernando Nino - CNES, Medias France, IRD, 18 Av Edouard Belin, F-31401 Toulouse 9, France
Massimiliano Patrini - Univ Cattolica Sacro Cuore, Ist Zootecn, Via E Parmense 84, I-29122 Piacenza, Italy
Ovidiu Paun - Univ Vienna, Inst Bot, Dept Biogeog, Rennweg 14, A-1030 Vienna, Austria
Marco Pellecchia - Univ Cattolica Sacro Cuore, Ist Zootecn, Via E Parmense 84, I-29122 Piacenza, Italy
Giovanni Perico - Univ Trieste, Dipartimento Biol, Via L Giorgieri 10, I-34127 Trieste, Italy
Halina Piekos-Mirkowa - Polish Acad Sci, Inst Bot, Lubics 46, PL-31512 Krakow, Poland
Peter Poschlod - University of Regensburg
Filippo Prosser - Museo Civ, Largo S Caterina 41, I-38068 Rovereto, Italy
Mihai Puscas - Inst Cercetari Biol, Str Republicii 48, Cluj Napoca 400015, Romania
Michal Ronikier - Polish Acad Sci, Inst Bot, Lubics 46, PL-31512 Krakow, Poland
Patrizia Rossi - Parco Nat Alpi Marittime, Corso Bianco 5, I-12010 Valdieri, CN, Italy
Martin Scheuerer - Univ Regensburg, Inst Bot, D-93040 Regensburg, Germany
Gerald Schneeweiss - Univ Vienna, Inst Bot, Dept Biogeog, Rennweg 14, A-1030 Vienna, Austria
Peter Schonswetter - Univ Vienna, Inst Bot, Dept Biogeog, Rennweg 14, A-1030 Vienna, Austria
Luise Schratt-Ehrendorfer - Univ Vienna, Inst Bot, Dept Biogeog, Rennweg 14, A-1030 Vienna, Austria
Fanny Schupfer - Univ Neuchatel, Lab Bot Evolut, 11 Rue Emile Argand, CH-2007 Neuchatel, Switzerland
Alberto Selvagg
Katharina Steinmann - Swiss Fed Res Inst WSL, Zurcherstr 111, CH-8903 Birmensdorf, Switzerland
Conny Thiel-Egenter - Swiss Fed Res Inst WSL, Zurcherstr 111, CH-8903 Birmensdorf, Switzerland
Andreas Tribsch - Univ Vienna, Inst Bot, Dept Biogeog, Rennweg 14, A-1030 Vienna, Austria
Marcela Van Loo - Univ Vienna, Inst Bot, Dept Biogeog, Rennweg 14, A-1030 Vienna, Austria
Manuela Winkler - Univ Vienna, Inst Bot, Dept Biogeog, Rennweg 14, A-1030 Vienna, Austria
Thomas Wohlgemuth - Swiss Fed Res Inst WSL, Zurcherstr 111, CH-8903 Birmensdorf, Switzerland
Tone Wraber - Univ Ljubljani, Oddelek Biol BF, Vecna Pot 111, SI-1000 Ljubljana, Slovenia
Niklaus Zimmermann - Swiss Fed Res Inst WSL, Zurcherstr 111, CH-8903 Birmensdorf, Switzerland
Gabriel Alziar - Parc Natl Mercantour, 23 Rue Italie, BP 1316, F-06006 Nice 1, France
Carlo Argenti - Museo Civ, Largo S Caterina 41, I-38068 Rovereto, Italy
Tinka Bacic - Univ Ljubljani, Oddelek Biol BF, Vecna Pot 111, SI-1000 Ljubljana, Slovenia
Jean-Eric Berthouse - Parc Natl Mercantour, 23 Rue Italie, BP 1316, F-06006 Nice 1, France
Alessio Bertolli - Museo Civ, Largo S Caterina 41, I-38068 Rovereto, Italy
Enrico Bressan - Univ Trieste, Dipartimento Biol, Via L Giorgieri 10, I-34127 Trieste, Italy
Francois Breton - Parc Natl Mercantour, 23 Rue Italie, BP 1316, F-06006 Nice 1, France
Massimo Buccheri - Univ Trieste, Dipartimento Biol, Via L Giorgieri 10, I-34127 Trieste, Italy
Sonia D'Andrea - Ist Piante da Legno & Ambiente, C So Casale 476, I-10132 Turin, Italy
Sergio Danieli - Univ Trieste, Dipartimento Biol, Via L Giorgieri 10, I-34127 Trieste, Italy
Rosanna De Mattei - Ist Piante da Legno & Ambiente, C So Casale 476, I-10132 Turin, Italy
Thierry Delahaye - Conservat Bot Natl Alpin CBNA, Domaine de Charance, F-05000 Gap, France
Roberto Della Vedova - Ist Piante da Legno & Ambiente, C So Casale 476, I-10132 Turin, Italy
Cedric Dentant - Conservat Bot Natl Alpin CBNA, Domaine de Charance, F-05000 Gap, France
Alessandra Di Turi - Ist Piante da Legno & Ambiente, C So Casale 476, I-10132 Turin, Italy
Wolfgang Diewald - Univ Regensburg, Inst Bot, D-93040 Regensburg, Germany
Rolland Douzet - Univ Grenoble 1, Lab Ecol Alpine, CNRS UMR 5553, BP 43, F-38041 Grenoble 9, France
Constantin Dragulescu - Inst Cercetari Biol, Str Republicii 48, Cluj Napoca 400015, Romania
Philippe Druart - Univ Neuchatel, Lab Bot Evolut, 11 Rue Emile Argand, CH-2007 Neuchatel, Switzerland
Siegrun Ertl - Univ Vienna, Inst Bot, Dept Biogeog, Rennweg 14, A-1030 Vienna, Austria
Delphine Fallour-Rubio - Parc Natl Mercantour, 23 Rue Italie, BP 1316, F-06006 Nice 1, France
Gino Fantini - Univ Trieste, Dipartimento Biol, Via L Giorgieri 10, I-34127 Trieste, Italy
Paolo Fantini - Parco Nat Alpi Marittime, Corso Bianco 5, I-12010 Valdieri, CN, Italy
Germano Federici - Univ Trieste, Dipartimento Biol, Via L Giorgieri 10, I-34127 Trieste, Italy
Franco Fenaroli - Univ Trieste, Dipartimento Biol, Via L Giorgieri 10, I-34127 Trieste, Italy
Viera Ferakova - Slovak Acad Sci, Inst Bot, Dept Vasc Plant Taxon, Dubravska Cesta 14, Bratislava SK-84523, Slovakia
Roberto Ferranti - Univ Trieste, Dipartimento Biol, Via L Giorgieri 10, I-34127 Trieste, Italy
Francesco Festii - Museo Civ, Largo S Caterina 41, I-38068 Rovereto, Italy
Bozo Frajman - Univ Ljubljani, Oddelek Biol BF, Vecna Pot 111, SI-1000 Ljubljana, Slovenia
Jean-Claude Gachet - Parc Natl Mercantour, 23 Rue Italie, BP 1316, F-06006 Nice 1, France
Bruno Gallino - Ist Piante da Legno & Ambiente, C So Casale 476, I-10132 Turin, Italy
Federica Gironi - Univ Trieste, Dipartimento Biol, Via L Giorgieri 10, I-34127 Trieste, Italy
Gheorghe Groza - Inst Cercetari Biol, Str Republicii 48, Cluj Napoca 400015, Romania
Andreas Hilpold - Naturmuseum Sudtirol, Museo Sci Nat, Alto Adige, Bindergasse 1, I-39100 Bolzano, Italy
Catherine Jollibert - Parc Natl Mercantour, 23 Rue Italie, BP 1316, F-06006 Nice 1, France
Denis Jordan - Conservat Bot Natl Alpin CBNA, Domaine de Charance, F-05000 Gap, France
Thomas Kiebacher - Naturmuseum Sudtirol, Museo Sci Nat, Alto Adige, Bindergasse 1, I-39100 Bolzano, Italy
Michael Kleih - Univ Trieste, Dipartimento Biol, Via L Giorgieri 10, I-34127 Trieste, Italy
Michel Lambertini - Parc Natl Mercantour, 23 Rue Italie, BP 1316, F-06006 Nice 1, France
Cesare Lasen - Univ Trieste, Dipartimento Biol, Via L Giorgieri 10, I-34127 Trieste, Italy
Petra Mair - Naturmuseum Sudtirol, Museo Sci Nat, Alto Adige, Bindergasse 1, I-39100 Bolzano, Italy
Luca Mangili - Univ Trieste, Dipartimento Biol, Via L Giorgieri 10, I-34127 Trieste, Italy
IntraBioDiv Consortium
Détails de publication: Molecular ecology, Vol.21(15), pp.3729-3738
Éditeur: Wiley
Nombre de pages: 10
Note de subvention: 03.0116-1; 03.0116-2 / Swiss State Secretariat for Education and Research (SER) CRSI33_127155 / AVE project (Swiss National Science Foundation); Swiss National Science Foundation (SNSF) GOCE-CT-2003-505376 / European Commission; European Union (EU); European Commission Joint Research Centre CCES Bio-Change project of the ETH domain 281422 / European Research Council under the European Community; European Research Council (ERC) PZ00P3_126624 / Swiss National Science Foundation; Swiss National Science Foundation (SNSF) CRSI33_127155 / Swiss National Science Foundation (SNF); Swiss National Science Foundation (SNSF) Institut Universitaire de France
Identifiants: 99136025909311
Unité académique: Centre d'Ecologie Fonctionnelle et Evolutive - CEFE
Langue: English
Type de ressource: Journal article