A new subfamily classification of the Leguminosae based on a taxonomically comprehensive phylogeny

Nasim Azani; Marielle Babineau; C. Donovan Bailey; Hannah Banks; Ariane R. Barbosa; Rafael Barbosa Pinto; James S. Boatwright; Leonardo M. Borges; Gillian K. Brown; Anne Bruneau; Elisa Candido; Domingos Cardoso; Kuo-Fang Chung; Ruth P. Clark; Adilva de S. Conceicao; Michael Crisp; Paloma Cubas; Alfonso Delgado-Salinas; Kyle G. Dexter; Jeff J. Doyle; Jerome Duminil; Ashley N. Egan; Manuel de la Estrella; Marcus J. Falcao; Dmitry A. Filatov; Ana Paula Fortuna-Perez; Renee H. Fortunato; Edeline Gagnon; Peter Gasson; Juliana Gastaldello Rando; Ana Maria Goulart de Azevedo Tozzi; Bee Gunn; David Harris; Elspeth Haston; Julie A. Hawkins; Patrick S. Herendeen; Colin E. Hughes; Joao R. V. Iganci; Firouzeh Javadi; Sheku Alfred Kanu; Shahrokh Kazempour-Osaloo; Geoffrey C. Kite; Bente B. Klitgaard; Fabio J. Kochanovski; Erik J. M. Koenen; Lynsey Kovar; Matt Lavin; Marianne le Roux; Gwilym P. Lewis; Haroldo C. de Lima; Maria Cristina Lopez-Roberts; Barbara Mackinder; Vitor Hugo Maia; Valery Malecot; Vidal F. Mansano; Brigitte Marazzi; Sawai Mattapha; Joseph T. Miller; Chika Mitsuyuki; Tania Moura; Daniel J. Murphy; Madhugiri Nageswara-Rao; Bruno Nevado; Danilo Neves; Dario I. Ojeda; R. Toby Pennington; Darirn E. Prado; Gerhard Prenner; Luciano Paganucci de Queiroz; Gustavo Ramos; Fabiana L. Ranzato Filardi; Petala G. Ribeiro; Maria de Lourdes Rico-Arce; Michael J. Sanderson; Juliana Santos-Silva; Wallace M. B. Sao-Mateus; Marcos J. S. Silva; Marcelo F. Simon; Carole Sinou; Cristiane Snak; Elvia R. de Souza; Janet Sprent; Kelly P. Steele; Julia E. Steier; Royce Steeves; Charles H. Stirton; Shuichiro Tagane; Benjamin M. Torke; Hironori Toyama; Daiane Trabuco da Cruz; Mohammad Vatanparast; Jan J. Wieringa; Michael Wink; Martin F. Wojciechowski; Tetsukazu Yahara; Tingshuang Yi; Erin Zimmerman

doi:10.12705/661.3

Retour

A new subfamily classification of the Leguminosae based on a taxonomically comprehensive phylogeny

Article de revue

Avec comité de lecture

A new subfamily classification of the Leguminosae based on a taxonomically comprehensive phylogeny

Nasim Azani, Marielle Babineau, C. Donovan Bailey, Hannah Banks, Ariane R. Barbosa, Rafael Barbosa Pinto, James S. Boatwright, Leonardo M. Borges, Gillian K. Brown, Anne Bruneau, …

Taxon, Vol.66(1), pp.44-77

01/02/2017

DOI: https://doi.org/10.12705/661.3

Résumé

Evolutionary Biology

Life Sciences & Biomedicine

Plant Sciences

Science & Technology

The classification of the legume family proposed here addresses the long-known non-monophyly of the traditionally recognised subfamily Caesalpinioideae, by recognising six robustly supported monophyletic subfamilies. This new classification uses as its framework the most comprehensive phylogenetic analyses of legumes to date, based on plastid matK gene sequences, and including near-complete sampling of genera (698 of the currently recognised 765 genera) and ca. 20% (3696) of known species. The matK gene region has been the most widely sequenced across the legumes, and in most legume lineages, this gene region is sufficiently variable to yield well-supported clades. This analysis resolves the same major clades as in other phylogenies of whole plastid and nuclear gene sets (with much sparser taxon sampling). Our analysis improves upon previous studies that have used large phylogenies of the Leguminosae for addressing evolutionary questions, because it maximises generic sampling and provides a phylogenetic tree that is based on a fully curated set of sequences that are vouchered and taxonomically validated. The phylogenetic trees obtained and the underlying data are available to browse and download, facilitating subsequent analyses that require evolutionary trees. Here we propose a new community-endorsed classification of the family that reflects the phylogenetic structure that is consistently resolved and recognises six subfamilies in Leguminosae: a recircumscribed Caesalpinioideae DC., Cercidoideae Legume Phylogeny Working Group (stat. nov.), Detarioideae Burmeist., Dialioideae Legume Phylogeny Working Group (stat. nov.), Duparquetioideae Legume Phylogeny Working Group (stat. nov.), and Papilionoideae DC. The traditionally recognised subfamily Mimosoideae is a distinct clade nested within the recircumscribed Caesalpinioideae and is referred to informally as the mimosoid clade pending a forthcoming formal tribal and/or clade-based classification of the new Caesalpinioideae. We provide a key for subfamily identification, descriptions with diagnostic charactertistics for the subfamilies, figures illustrating their floral and fruit diversity, and lists of genera by subfamily. This new classification of Leguminosae represents a consensus view of the international legume systematics community; it invokes both compromise and practicality of use.

Indicateurs

1 Consultations de la notice

Détails

Titre: A new subfamily classification of the Leguminosae based on a taxonomically comprehensive phylogeny
Créateurs - sans rôle: Nasim Azani - Univ Tehran, Dept Plant Sci, Tehran, Iran
Marielle Babineau - Univ Montreal, Inst Rech & Biol Veg, Montreal, PQ, Canada
C. Donovan Bailey - New Mexico State University
Hannah Banks - Royal Bot Gardens Kew, Richmond, Surrey, England
Ariane R. Barbosa - Univ Estadual Feira de Santana, Dept Ciencias Biol, Feira De Santana, Brazil
Rafael Barbosa Pinto - Univ Estadual Campinas, Dept Biol Vegetal, Campinas, SP, Brazil
James S. Boatwright - Univ Western Cape, Dept Biodivers & Conservat Biol, Cape Town, South Africa
Leonardo M. Borges - Univ Fed Sao Carlos, Dept Bot, Sao Carlos, SP, Brazil
Gillian K. Brown - Univ Melbourne, Australia & Queensland Herbarium, Sch Biosci, Toowong, Australia
Anne Bruneau - Univ Montreal, Inst Rech & Biol Veg, Montreal, PQ, Canada
Elisa Candido - Univ Estadual Campinas, Dept Biol Vegetal, Campinas, SP, Brazil
Domingos Cardoso - Univ Fed Bahia, Inst Biol, Salvador, BA, Brazil
Kuo-Fang Chung - Natl Taiwan Univ, Sch Forestry & Resource Conservat, Taipei, Taiwan
Ruth P. Clark - Royal Bot Gardens Kew, Richmond, Surrey, England
Adilva de S. Conceicao - Univ Tehran, Dept Plant Sci, Tehran, Iran
Michael Crisp - Australian Natl Univ, Res Sch Biol, Canberra, ACT, Australia
Paloma Cubas - Univ Complutense, Dept Biol Veg 2, Madrid, Spain
Alfonso Delgado-Salinas - Univ Tehran, Dept Plant Sci, Tehran, Iran
Kyle G. Dexter - Univ Edinburgh, Sch GeoSci, Edinburgh, Midlothian, Scotland
Jeff J. Doyle - Cornell Univ, Dept Plant Biol, Ithaca, NY USA
Jerome Duminil - Univ Libre Bruxelles, Serv Evolut Biolog & Ecol, Brussels, Belgium
Ashley N. Egan - Natl Museum Nat Hist, Smithsonian Inst, Dept Bot, Washington, DC 20560 USA
Manuel de la Estrella - Royal Bot Gardens Kew, Richmond, Surrey, England
Marcus J. Falcao - Inst Pesquisas, Jardim Botan Rio De Janeiro, Rio De Janeiro, Brazil
Dmitry A. Filatov - Univ Oxford, Dept Plant Sci, Oxford, England
Ana Paula Fortuna-Perez - Univ Estadual Paulista, Dept Bot, Botucatu, SP, Brazil
Renee H. Fortunato - Consejo Nacl Invest Cient & Tecn, CIRN INTA, Inst Recursos Biol, Buenos Aires, DF, Argentina
Edeline Gagnon - Univ Montreal, Inst Rech & Biol Veg, Montreal, PQ, Canada
Peter Gasson - Royal Bot Gardens Kew, Richmond, Surrey, England
Juliana Gastaldello Rando - Univ Fed Oeste Bahia, Ciencias Ambientais, Barreiras, Brazil
Ana Maria Goulart de Azevedo Tozzi - Univ Estadual Campinas, Dept Biol Vegetal, Campinas, SP, Brazil
Bee Gunn - Australian Natl Univ, Res Sch Biol, Canberra, ACT, Australia
David Harris - Royal Bot Gardens, Edinburgh, Midlothian, Scotland
Elspeth Haston - Royal Bot Gardens, Edinburgh, Midlothian, Scotland
Julie A. Hawkins - Univ Reading, Sch Biol Sci, Reading, Berks, England
Patrick S. Herendeen - Chicago Bot Garden, Glencoe, IL USA
Colin E. Hughes - Univ Zurich, Dept Systemat & Evolutionary Bot, Zurich, Switzerland
Joao R. V. Iganci - Univ Fed Rio Grande do Sul, Dept Bot, Porto Alegre, RS, Brazil
Firouzeh Javadi - Kyushu Univ, Inst Decis Sci Sustainable Soc, Fukuoka, Japan
Sheku Alfred Kanu - Univ South Africa, Dept Agr & Anim Hlth, ZA-0001 Pretoria, South Africa
Shahrokh Kazempour-Osaloo - Tarbiat Modares Univ, Dept Plant Biol, Tehran, Iran
Geoffrey C. Kite - Royal Bot Gardens Kew, Richmond, Surrey, England
Bente B. Klitgaard - Royal Bot Gardens Kew, Richmond, Surrey, England
Fabio J. Kochanovski - Univ Estadual Campinas, Dept Biol Vegetal, Campinas, SP, Brazil
Erik J. M. Koenen - University of Zurich
Lynsey Kovar - New Mexico State Univ, Dept Biol, Las Cruces, NM USA
Matt Lavin - Montana State Univ, Plant Sci & Plant Pathol, Bozeman, MT USA
Marianne le Roux - South African Natl Biodivers Inst, Silverton, South Africa
Gwilym P. Lewis - Royal Bot Gardens Kew, Richmond, Surrey, England
Haroldo C. de Lima - Inst Pesquisas, Jardim Botan Rio De Janeiro, Rio De Janeiro, Brazil
Maria Cristina Lopez-Roberts - Univ Estadual Feira de Santana, Dept Ciencias Biol, Feira De Santana, Brazil
Barbara Mackinder - Royal Bot Gardens, Edinburgh, Midlothian, Scotland
Vitor Hugo Maia - Pontificia Univ Catolica Rio de Janeiro, Dept Biol, Rio De Janeiro, Brazil
Valery Malecot - Univ Angers, INRA, Agrocampus Ouest, Angers, France
Vidal F. Mansano - Inst Pesquisas, Jardim Botan Rio De Janeiro, Rio De Janeiro, Brazil
Brigitte Marazzi - Museo Cantonale Storia Nat, Lugano, Switzerland
Sawai Mattapha - Univ Reading, Sch Biol Sci, Reading, Berks, England
Joseph T. Miller - Natl Sci Fdn, Off Int Sci & Engn, Arlington, VA 22230 USA
Chika Mitsuyuki - Kyushu Univ, Dept Biol, Fukuoka, Japan
Tania Moura - Missouri Bot Garden, St Louis, MO USA
Daniel J. Murphy - Royal Bot Gardens Victoria, Plant Sci & Biodivers, Melbourne, Vic, Australia
Madhugiri Nageswara-Rao - New Mexico State Univ, Dept Biol, Las Cruces, NM USA
Bruno Nevado - Univ Oxford, Dept Plant Sci, Oxford, England
Danilo Neves - Royal Bot Gardens Kew, Richmond, Surrey, England
Dario I. Ojeda - Univ Libre Bruxelles, Serv Evolut Biolog & Ecol, Brussels, Belgium
R. Toby Pennington - Royal Bot Gardens, Edinburgh, Midlothian, Scotland
Darirn E. Prado - Univ Nacl Rosario, Fac Ciencias Agr, IICAR CONICET, Botan, Zavalla, Argentina
Gerhard Prenner - Royal Bot Gardens Kew, Richmond, Surrey, England
Luciano Paganucci de Queiroz - Univ Estadual Feira de Santana, Dept Ciencias Biol, Feira De Santana, Brazil
Gustavo Ramos - Univ Fed Bahia, Inst Biol, Salvador, BA, Brazil
Fabiana L. Ranzato Filardi - Inst Pesquisas, Jardim Botan Rio De Janeiro, Rio De Janeiro, Brazil
Petala G. Ribeiro - Univ Estadual Feira de Santana, Dept Ciencias Biol, Feira De Santana, Brazil
Maria de Lourdes Rico-Arce - Royal Bot Gardens Kew, Richmond, Surrey, England
Michael J. Sanderson - University of Arizona
Juliana Santos-Silva - Univ Estado Bahia, Dept Educ, Campus VIII, Paulo Afonso, Brazil
Wallace M. B. Sao-Mateus - Univ Fed Rio Grande do Norte, Sistemat Evolucao, Rio De Janeiro, Brazil
Marcos J. S. Silva - Univ Fed Goias, Inst Ciencias Biol, Dept Bot, Goiania, Go, Brazil
Marcelo F. Simon - Embrapa Recursos Geneticos Biotecnol, Brasilia, DF, Brazil
Carole Sinou - Univ Zurich, Dept Systemat & Evolutionary Bot, Zurich, Switzerland
Cristiane Snak - Univ Estadual Feira de Santana, Dept Ciencias Biol, Feira De Santana, Brazil
Elvia R. de Souza - Univ Estado Bahia, Dept Educ, Campus VIII, Paulo Afonso, Brazil
Janet Sprent - Univ Dundee, Dept Plant Sci, Dundee, Scotland
Kelly P. Steele - Arizona State Univ Polytech, Fac Sci & Math, Mesa, AZ USA
Julia E. Steier - Arizona State Univ, Sch Life Sci, Tempe, AZ USA
Royce Steeves - Univ Montreal, Inst Rech & Biol Veg, Montreal, PQ, Canada
Charles H. Stirton - Univ Cape Town, Bolus Herbarium, Dept Biol Sci, Rondebosch, South Africa
Shuichiro Tagane - Kyushu Univ, Dept Biol, Fukuoka, Japan
Benjamin M. Torke - Inst Systemat Bot, New York Bot Garden, Bronx, NY USA
Hironori Toyama - Kyushu Univ, Dept Biol, Fukuoka, Japan
Daiane Trabuco da Cruz - Univ Estadual Feira de Santana, Dept Ciencias Biol, Feira De Santana, Brazil
Mohammad Vatanparast - Natl Museum Nat Hist, Smithsonian Inst, Dept Bot, Washington, DC 20560 USA
Jan J. Wieringa - Naturalis Biodivers Ctr, Leiden, Netherlands
Michael Wink - Heidelberg Univ, Inst Pharm & Mol Biotechnol, Heidelberg, Germany
Martin F. Wojciechowski - Arizona State University
Tetsukazu Yahara - Kyushu Univ, Dept Biol, Fukuoka, Japan
Tingshuang Yi - Chinese Acad Sci, Kunming Inst Bot, Beijing, Peoples R China
Erin Zimmerman - Univ Montreal, Inst Rech & Biol Veg, Montreal, PQ, Canada
Détails de publication: Taxon, Vol.66(1), pp.44-77
Éditeur: Wiley
Nombre de pages: 34
Note de subvention: Conselho Nacional de Desenvolvimento Cientifico e Tecnologico CNPq of Brazil; Conselho Nacional de Desenvolvimento Cientifico e Tecnologico (CNPQ) 563084/2010-3 / Conselho Nacional de Desenvolvimento Cientifico e Tecnologico (Project Sisbiota) 31003A_13552 / Swiss National Science Foundation; Swiss National Science Foundation (SNSF) 15K18472; 16K07234 / Grants-in-Aid for Scientific Research; Ministry of Education, Culture, Sports, Science and Technology, Japan (MEXT); Japan Society for the Promotion of Science; Grants-in-Aid for Scientific Research (KAKENHI) Natural Sciences and Engineering Research Council of Canada; Natural Sciences and Engineering Research Council of Canada (NSERC); CGIAR DEB-1352217 / U.S. National Science Foundation; National Science Foundation (NSF) Fundacao de Amparo a Pesquisa do Estado de Sao Paulo FAPESP; Fundacao de Amparo a Pesquisa do Estado de Sao Paulo (FAPESP) Environment Research and Technology Development Fund (S9) of the Ministry of the Environment of Japan 5525892011-0 / Conselho Nacional de Desenvolvimento Cientifico e Tecnologico (Project Casadinho/Procad) 1951/13-0 / Coordenacao de Aperfeicoamento de Pessoal de Nivel Superior (CAPES/Program POS CSF)
Identifiants: 99136441809311
Unité académique: Diversité, Adaptation et Développement des plantes - DIADE
Langue: English
Type de ressource: Journal article