TABLE 1 in Aquatic Biotas of Sundaland Are Fragmented But Not Refugial

Erwan Delrieu-Trottin; Sélim Ben Chéhida; Tedjo Sukmono; Hadi Dahruddin; Arni Sholihah; Kustiati Kustiati; Yuli Fitriana; Zainal Abidin Muchlisin; Roza Elvyra; Arif Wibowo; Ilham Vemandra Utama; Ujang Nurhaman; Sopian Sauri; Renny Risdawati; Muhamad Syamsul Arifin Zein; Juliette Pouzadoux; Jean-François Agnèse; Marie-Ka Tilak; Lawrence M Page; Thomas von Rintelen; Daisy Wowor; Dirk Steinke; Stefano Mona; Lukas Rüber; Paul D N Hebert; Nicolas Hubert

doi:10.5281/zenodo.15390331

Jeu de données

TABLE 1 in Aquatic Biotas of Sundaland Are Fragmented But Not Refugial

Erwan Delrieu-Trottin, Sélim Ben Chéhida, Tedjo Sukmono, Hadi Dahruddin, Arni Sholihah, Kustiati Kustiati, Yuli Fitriana, Zainal Abidin Muchlisin, Roza Elvyra, Arif Wibowo, …

Zenodo

01/03/2025

DOI: https://doi.org/10.5281/zenodo.15390331

Résumé

Biodiversity

Taxonomy

TABLE 1. Summary statistics of genetic diversity for the 9 model species, including the number of individuals (Ind.), number of sampling sites (Sites), maximum standard length (Max. SL), generation time (g), number of MOTUs derived from the majority-rule consensus of the 6 delimitation methods (MOTUs), time (in years) to the most recent common ancestor (TMRCA) of the mitochondrial haplotypes with minimum and maximum age of the 95 % highest posterior densities (HPDs), average nucleotide diversity (π) across the 13 mitochondrial protein-coding genes with minimum and maximum values, average nucleotide diversity (h) across the 13 protein-coding genes with minimum and maximum values, and average Tajima’s D across the 13 protein-coding genes with minimum and maximum values. SpeciesInd.SitesMax. SL size (cm)g (years)MOTUsTMRCA (95% HPDs)Mean π (min – max)Mean h (min – max)Mean Tajima’s D (min – max)Anabas testudineus3314250.61163,245 (97,358 –222,373)0.003 (0.001 –0.007)0.809 (0.222 –1)− 0,724 (− 1.794; 0.156)Barbodes binotatus22963203.363,477,172 (2,785,835 – 4,192,825)0.034 (0.014 – 0.046)0.987 (0.8590– 1)− 1.205 (− 2.516; − 0.564)Channa striata117291008.3133,564 (14,543 – 54,366)0.013 (0.01 –0.018)0.953 (0.860 – 1)− 0.217 (− 2.562; 0.675)Chitala lopis138394.522,135,705 (1,413,433 – 2,618,986)0.032 (0.012 – 0.052)0.965 (0.9– 1)0.088 (− 0.480; 0.496)Hampala macrolepidota218702.43755,054 (307,116 – 1,055,764)0.008 (0.002 –0.013)0.856 (0.250 – 0.964)− 1.046 (− 2.947; 0.215)Monopterus jaoanensis51141008.377,866,547 (5,041,142 –10,616,661)0.067 (0.039 – 0.102)0.958 (0.8– 1)−0.274 (− 2.278; 0.854)Parachela hypophthalmus601816.52.331,750,366 (952,746 – 2,351,482)0.024 (0.011 – 0.041)0.934 (0.810 – 1)0.609 (0.239; 0.936)Trichopodus trichopterus6920151.522,173,705 (1,112,577 – 2,880,424)0.028 (0.011 – 0.040)0.947 (0.644 – 1)0.858 (− 1.747; 1.478)Trigonopoma pauciperforatum1404471.2115,556,063 (4,611,659 –6,619,795)0.066 (0.044 – 0.081)0.996 (0.968 – 1)−0.279 (− 1.539; 0.007)

Indicateurs

1 Consultations de la notice

Détails

Titre: TABLE 1 in Aquatic Biotas of Sundaland Are Fragmented But Not Refugial
Créateurs - sans rôle: Erwan Delrieu-Trottin - ISEM, Unioersité de Montpellier, CNRS, IRD, Place Eugène Bataillon, Montpellier 34095, France & Museum für Naturkunde, Leibniz-Institut für Eoolutions- und Biodioersitätsforschung an der Humboldt-Unioersität zu Berlin, Inoalidenstrasse 43, Berlin 10115, Germany & CEFE, Unioersité de Montpellier, CNRS, EPHE-PSL Unioersity, IRD, Route de Mende, Montpellier 34090, France
Sélim Ben Chéhida - ISEM, Unioersité de Montpellier, CNRS, IRD, Place Eugène Bataillon, Montpellier 34095, France
Tedjo Sukmono - Department of Biology, Unioersitas Jambi, Jalan Lintas Jambi – Muara Bulian Km 15, Jambi 36122, Sumatra, Indonesia
Hadi Dahruddin - Museum Zoologicum Bogoriense, Research Center for Biosystematics and Eoolution, National Research and Innooation Agency (BRIN), Jalan Raya Jakarta Bogor Km 46, Cibinong 16911, Indonesia
Arni Sholihah - School of Life Sciences and Technology, Instut Teknologi Bandung, Jl. Ganesa No. 10, Bandung 40132, Indonesia & Museum Zoologi ITB, Jl. Let. Jend. Purn. Dr. (HC) Mashudi No. 1 Jatinnagor, Sumedang 45363, Indonesia
Kustiati Kustiati - Department of Biology, Unioersitas Tanjungpura, Jalan Prof. Dr. H. Hadari Naaeaaei, Pontianak 78124, Indonesia
Yuli Fitriana - Museum Zoologicum Bogoriense, Research Center for Biosystematics and Eoolution, National Research and Innooation Agency (BRIN), Jalan Raya Jakarta Bogor Km 46, Cibinong 16911, Indonesia
Zainal Abidin Muchlisin - Faculty of Marine and Fisheries, Syiah Kuala Unioersity, Jl. Teuku Nyak Arief No. 441, Banda Aceh 23111, Indonesia
Roza Elvyra - Department of Biology, Unioersitas Riau, Simpang Baru, Tampan, Pekanbaru 28293, Indonesia
Arif Wibowo - Indonesia Research Center for Conseroation of Marine and Inland Water Resources, National Research and Innooation Agency, Jl. Raya Jakarta-Bogor No. Km 46, Cibinong, Bogor 16911, Indonesia
Ilham Vemandra Utama - Museum Zoologicum Bogoriense, Research Center for Biosystematics and Eoolution, National Research and Innooation Agency (BRIN), Jalan Raya Jakarta Bogor Km 46, Cibinong 16911, Indonesia
Ujang Nurhaman - Museum Zoologicum Bogoriense, Research Center for Biosystematics and Eoolution, National Research and Innooation Agency (BRIN), Jalan Raya Jakarta Bogor Km 46, Cibinong 16911, Indonesia
Sopian Sauri - Museum Zoologicum Bogoriense, Research Center for Biosystematics and Eoolution, National Research and Innooation Agency (BRIN), Jalan Raya Jakarta Bogor Km 46, Cibinong 16911, Indonesia
Renny Risdawati - Department of Applied Biology, Unioersitas PGRI Sumatera Barat, Jl Gunung Pangilun, Padang 25137, Indonesia
Muhamad Syamsul Arifin Zein - Museum Zoologicum Bogoriense, Research Center for Biosystematics and Eoolution, National Research and Innooation Agency (BRIN), Jalan Raya Jakarta Bogor Km 46, Cibinong 16911, Indonesia
Juliette Pouzadoux - ISEM, Unioersité de Montpellier, CNRS, IRD, Place Eugène Bataillon, Montpellier 34095, France
Jean-François Agnèse - ISEM, Unioersité de Montpellier, CNRS, IRD, Place Eugène Bataillon, Montpellier 34095, France
Marie-Ka Tilak - ISEM, Unioersité de Montpellier, CNRS, IRD, Place Eugène Bataillon, Montpellier 34095, France
Lawrence M Page - Florida Museum of Natural History, 1659 Museum Road, Gainesoille, FL 32611 - 7800, USA
Thomas von Rintelen - Museum für Naturkunde
Daisy Wowor - Museum Zoologicum Bogoriense, Research Center for Biosystematics and Eoolution, National Research and Innooation Agency (BRIN), Jalan Raya Jakarta Bogor Km 46, Cibinong 16911, Indonesia
Dirk Steinke - Centre for Biodioersity Genomics, Unioersity of Guelph, 50 Stone Road East, Guelph, ON N 1 G 2 W 1, Canada
Stefano Mona - Muséum national d'Histoire naturelle
Lukas Rüber - Naturhistorisches Museum Bern, Bernastrasse 15, Bern 3005, Saeitzerland & Aquatic Ecology and Eoolution, Institute of Ecology and Eoolution, Unioersity of Bern, Baltzerstrasse 6, Bern 3012, Saeitzerland
Paul D N Hebert - Centre for Biodioersity Genomics, Unioersity of Guelph, 50 Stone Road East, Guelph, ON N 1 G 2 W 1, Canada
Nicolas Hubert - ISEM, Unioersité de Montpellier, CNRS, IRD, Place Eugène Bataillon CC 065, Montpellier 34095, France
Éditeur: Zenodo
Identifiants: 99160619909311
Unité académique: Institut des Sciences de l'Evolution - Montpellier - ISEM
Langue: English
Type de ressource: Dataset