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Supporting data for "A simple ATAC-seq protocol for population epigenetics"
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Supporting data for "A simple ATAC-seq protocol for population epigenetics"

Ronaldo de Carvalho AUGUSTO, Aki Minoda et Christoph Grunau
Zenodo
15/05/2020

Résumé

epigenetics, epigenomics, ATAC-seq, Daphnia pulex, Schistosoma mansoni
This is supporting data for an article in which we describe a protocol for the generation of sequence-ready libraries for population epigenomics studies. The protocol is a streamlined version of the Assay for transposase accessible chromatin with high-throughput sequencing (ATAC-seq) that provides a positive display of accessible, presumably euchromatic regions. The protocol is straightforward and can be used with small individuals such as daphnia and schistosome worms, and probably many other biological samples of comparable size, and it requires little molecular biology handling expertise. In "Agarose picture.Tif" the left lane shows the 100 bp size marker, first 10 bands from down to top: 100bp, 200bp, 300bp, 400bp, 500bp, 600bp, 700bp, 800bp, 900bp and 1kbp. Produced at IHPE (http://ihpe.univ-perp.fr/)

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url
https://doi.org/10.5281/zenodo.3828599Afficher
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1 Consultations de la notice

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