Global transpiration data from sap flow measurements: the SAPFLUXNET database

Rafael Poyatos; Víctor Granda; Víctor Flo; Mark A Adams; Balázs Adorján; David Aguadé; Marcos P M Aidar; Scott Allen; M Susana Alvarado-Barrientos; Kristina J Anderson-Teixeira; Luiza Maria Aparecido; M Altaf Arain; Ismael Aranda; Heidi Asbjornsen; Robert Baxter; Eric Beamesderfer; Z Carter Berry; Daniel Berveiller; Bethany Blakely; Johnny Boggs; Gil Bohrer; Paul V Bolstad; Damien Bonal; Rosvel Bracho; Patricia Brito; Jason Brodeur; Fernando Casanoves; Jérôme Chave; Hui Chen; Cesar Cisneros; Kenneth Clark; Edoardo Cremonese; Hongzhong Dang; Jorge S David; Teresa S David; Nicolas Delpierre; Ankur R Desai; Frederic C Do; Michal Dohnal; Jean-Christophe Domec; Sebinasi Dzikiti; Colin Edgar; Rebekka Eichstaedt; Tarek S El-Madany; Jan Elbers; Cleiton B Eller; Eugénie S Euskirchen; Brent Ewers; Patrick Fonti; Alicia Forner; David I Forrester; Helber C Freitas; Marta Galvagno; Omar Garcia-Tejera; Chandra Prasad Ghimire; Teresa E Gimeno; John Grace; André Granier; Anne Griebel; Yan Guangyu; Mark B Gush; Paul J Hanson; Niles J Hasselquist; Ingo Heinrich; Virginia Hernandez-Santana; Valentine Herrmann; Teemu Hölttä; Friso Holwerda; James Irvine; Supat Isarangkool Na Ayutthaya; Paul G Jarvis; Hubert Jochheim; Carlos A Joly; Julia Kaplick; Hyun Seok Kim; Leif Klemedtsson; Heather Kropp; Fredrik Lagergren; Patrick Lane; Petra Lang; Andrei Lapenas; Víctor Lechuga; Minsu Lee; Christoph Leuschner; Jean-Marc Limousin; Juan Carlos Linares; Maj-Lena Linderson; Anders Lindroth; Pilar Llorens; Álvaro López-Bernal; Michael M Loranty; Dietmar Lüttschwager; Cate Macinnis-Ng; Isabelle Maréchaux; Timothy A Martin; Ashley Matheny; Nate Mcdowell; Sean Mcmahon; Patrick Meir; Ilona Mészáros; Mirco Migliavacca; Patrick Mitchell; Meelis Mölder; Leonardo Montagnani; Georgianne W Moore; Ryogo Nakada; Furong Niu; Rachael H Nolan; Richard Norby; Kimberly Novick; Walter Oberhuber; Nikolaus Obojes; A Christopher Oishi; Rafael S Oliveira; Ram Oren; Jean-Marc Ourcival; Teemu Paljakka; Oscar Perez-Priego; Pablo L Peri; Richard L Peters; Sebastian Pfautsch; William T Pockman; Yakir Preisler; Katherine Rascher; George Robinson; Humberto Rocha; Alain Rocheteau; Alexander Röll; Bruno H P Rosado; Lucy Rowland; Alexey V Rubtsov; Santiago Sabaté; Yann Salmon; Roberto L Salomón; Elisenda Sánchez-Costa; Karina V R Schäfer; Bernhard Schuldt; Alexandr Shashkin; Clément Stahl; Marko Stojanović; Juan Carlos Suárez; Ge Sun; Justyna Szatniewska; Fyodor Tatarinov; Frank M Thomas; Pantana Tor-Ngern; Josef Urban; Fernando Valladares; Christiaan van Der Tol; Ilja van Meerveld; Andrej Varlagin; Holm Voigt; Jeffrey Warren; Christiane Werner; Willy Werner; Gerhard Wieser; Lisa Wingate; Stan Wullschleger; Koong Yi; Roman Zweifel; Kathy Steppe; Maurizio Mencuccini; Jordi Martínez-Vilalta

doi:10.5194/essd-13-2607-2021

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Global transpiration data from sap flow measurements: the SAPFLUXNET database

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Global transpiration data from sap flow measurements: the SAPFLUXNET database

Rafael Poyatos, Víctor Granda, Víctor Flo, Mark A Adams, Balázs Adorján, David Aguadé, Marcos P M Aidar, Scott Allen, M Susana Alvarado-Barrientos, Kristina J Anderson-Teixeira, …

Earth System Science Data, Vol.13, pp.2607 - 2649

06/2021

DOI: https://doi.org/10.5194/essd-13-2607-2021

Abstract

Sap flow

Water flux

Transpiration

Tree

Global database

Sap flow

Plant transpiration links physiological responses of vegetation to water supply and demand with hydrological, energy, and carbon budgets at the land–atmosphere interface. However, despite being the main land evaporative flux at the global scale, transpiration and its response to environmental drivers are currently not well constrained by observations. Here we introduce the first global compilation of whole-plant transpiration data from sap flow measurements (SAPFLUXNET, https://sapfluxnet.creaf.cat/, last access: 8 June 2021). We harmonized and quality-controlled individual datasets supplied by contributors worldwide in a semi-automatic data workflow implemented in the R programming language. Datasets include sub-daily time series of sap flow and hydrometeorological drivers for one or more growing seasons, as well as metadata on the stand characteristics, plant attributes, and technical details of the measurements. SAPFLUXNET contains 202 globally distributed datasets with sap flow time series for 2714 plants, mostly trees, of 174 species. SAPFLUXNET has a broad bioclimatic coverage, with woodland/shrubland and temperate forest biomes especially well represented (80 % of the datasets). The measurements cover a wide variety of stand structural characteristics and plant sizes. The datasets encompass the period between 1995 and 2018, with 50 % of the datasets being at least 3 years long. Accompanying radiation and vapour pressure deficit data are available for most of the datasets, while on-site soil water content is available for 56 % of the datasets. Many datasets contain data for species that make up 90 % or more of the total stand basal area, allowing the estimation of stand transpiration in diverse ecological settings. SAPFLUXNET adds to existing plant trait datasets, ecosystem flux networks, and remote sensing products to help increase our understanding of plant water use, plant responses to drought, and ecohydrological processes. SAPFLUXNET version 0.1.5 is freely available from the Zenodo repository (https://doi.org/10.5281/zenodo.3971689; Poyatos et al., 2020a). The “sapfluxnetr” R package – designed to access, visualize, and process SAPFLUXNET data – is available from CRAN.

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Title: Global transpiration data from sap flow measurements: the SAPFLUXNET database
Creators - without role: Rafael Poyatos - Universitat Autònoma de Barcelona
Víctor Granda - Centre for Research on Ecology and Forestry Applications
Víctor Flo - Centre for Research on Ecology and Forestry Applications
Mark A Adams - University of Sydney
Balázs Adorján - University of Debrecen
David Aguadé - Centre for Research on Ecology and Forestry Applications
Marcos P M Aidar - Instituto de Botânica
Scott Allen - University of Nevada, Reno
M Susana Alvarado-Barrientos - Instituto de Ecología
Kristina J Anderson-Teixeira - Smithsonian Tropical Research Institute
Luiza Maria Aparecido - Texas A&M University
M Altaf Arain - McMaster University
Ismael Aranda - Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria
Heidi Asbjornsen - University of New Hampshire
Robert Baxter - Durham University
Eric Beamesderfer - McMaster University
Z Carter Berry - Chapman University
Daniel Berveiller - AgroParisTech
Bethany Blakely - University of Illinois Urbana-Champaign
Johnny Boggs - Southern Research Station
Gil Bohrer - The Ohio State University
Paul V Bolstad - Minnesota Department of Natural Resources
Damien Bonal - AgroParisTech
Rosvel Bracho - University of Florida
Patricia Brito - Universidad de La Laguna
Jason Brodeur - McMaster University
Fernando Casanoves - Centro Agronomico Tropical de Investigacion y Ensenanza Catie
Jérôme Chave - Laboratoire Evolution et Diversite Biologique
Hui Chen - Xiamen University
Cesar Cisneros
Kenneth Clark - Northern Research Station
Edoardo Cremonese - Agenzia Regionale per la Protezione Ambientale
Hongzhong Dang - Chinese Academy of Forestry
Jorge S David - University of Lisbon
Teresa S David - University of Lisbon
Nicolas Delpierre - Institut Universitaire de France
Ankur R Desai - University of Wisconsin–Madison
Frederic C Do - L'Institut Agro
Michal Dohnal - Czech Technical University in Prague
Jean-Christophe Domec
Sebinasi Dzikiti - Stellenbosch University
Colin Edgar - University of Alaska Fairbanks
Rebekka Eichstaedt - Universität Trier
Tarek S El-Madany - Max Planck Institute for Biogeochemistry
Jan Elbers - Wageningen University & Research
Cleiton B Eller - Universidade Estadual de Campinas (UNICAMP)
Eugénie S Euskirchen - University of Alaska Fairbanks
Brent Ewers - University of Wyoming
Patrick Fonti - Swiss Federal Institute for Forest, Snow and Landscape Research
Alicia Forner - Museo Nacional de Ciencias Naturales
David I Forrester - Swiss Federal Institute for Forest, Snow and Landscape Research
Helber C Freitas - Universidade de São Paulo
Marta Galvagno - Agenzia Regionale per la Protezione Ambientale
Omar Garcia-Tejera - Institute for Research and Technology in Food and Agriculture
Chandra Prasad Ghimire - AgResearch
Teresa E Gimeno - Basque Centre for Climate Change
John Grace - University of Edinburgh
André Granier - Ecologie et Ecophysiologie Forestières
Anne Griebel - University of Melbourne
Yan Guangyu - Xiamen University
Mark B Gush - Royal Horticultural Society
Paul J Hanson - Oak Ridge National Laboratory
Niles J Hasselquist - Swedish University of Agricultural Sciences
Ingo Heinrich - Helmholtz Centre Potsdam - GFZ German Research Centre for Geosciences
Virginia Hernandez-Santana - Instituto de Recursos Naturales y Agrobiología de Sevilla
Valentine Herrmann - Smithsonian Conservation Biology Institute
Teemu Hölttä - University of Helsinki
Friso Holwerda - Universidad Nacional Autónoma de México
James Irvine - University of Edinburgh
Supat Isarangkool Na Ayutthaya
Paul G Jarvis - University of Edinburgh
Hubert Jochheim - Leibniz Centre for Agricultural Landscape Research
Carlos A Joly - Universidade Estadual de Campinas (UNICAMP)
Julia Kaplick - University of Auckland
Hyun Seok Kim - Seoul National University
Leif Klemedtsson - University of Gothenburg
Heather Kropp - Colgate University
Fredrik Lagergren - Lund University
Patrick Lane
Petra Lang
Andrei Lapenas - University at Albany, State University of New York
Víctor Lechuga - Universidad de Jaén
Minsu Lee - Seoul National University
Christoph Leuschner - University of Göttingen
Jean-Marc Limousin - Université de Montpellier, Centre d'Ecologie Fonctionnelle et Evolutive - CEFE
Juan Carlos Linares - Universidad Pablo de Olavide
Maj-Lena Linderson
Anders Lindroth - Lund University
Pilar Llorens - Institute of Environmental Assessment and Water Research
Álvaro López-Bernal - University of Córdoba
Michael M Loranty - Colgate University
Dietmar Lüttschwager - Leibniz Centre for Agricultural Landscape Research
Cate Macinnis-Ng - University of Auckland
Isabelle Maréchaux - Université de Montpellier, BotAnique et Modélisation de l'Architecture des Plantes et des végétations - AMAP
Timothy A Martin - University of Florida
Ashley Matheny - The University of Texas at Austin
Nate Mcdowell - Pacific Northwest National Laboratory
Sean Mcmahon - ForestGEO
Patrick Meir - Australian National University
Ilona Mészáros - University of Debrecen
Mirco Migliavacca - Max Planck Institute for Biogeochemistry
Patrick Mitchell - Commonwealth Scientific and Industrial Research Organisation
Meelis Mölder - Lund University
Leonardo Montagnani - Free University of Bozen-Bolzano
Georgianne W Moore - Texas A&M University
Ryogo Nakada - Forestry and Forest Products Research Institute
Furong Niu - University of Göttingen
Rachael H Nolan - Western Sydney University
Richard Norby - University of Tennessee at Knoxville
Kimberly Novick - Indiana University Bloomington
Walter Oberhuber - Universität Innsbruck
Nikolaus Obojes - Eurac Research
A Christopher Oishi - Southern Research Station
Rafael S Oliveira - Universidade Estadual de Campinas (UNICAMP)
Ram Oren - University of Helsinki
Jean-Marc Ourcival - Université de Montpellier, Centre d'Ecologie Fonctionnelle et Evolutive - CEFE
Teemu Paljakka - University of Helsinki
Oscar Perez-Priego - Macquarie University
Pablo L Peri - National Agricultural Technology Institute
Richard L Peters - Swiss Federal Institute for Forest, Snow and Landscape Research
Sebastian Pfautsch - Western Sydney University
William T Pockman - University of New Mexico
Yakir Preisler - Weizmann Institute of Science
Katherine Rascher - University Hospital Cologne
George Robinson - University at Albany, State University of New York
Humberto Rocha
Alain Rocheteau - Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement
Alexander Röll - University of Göttingen
Bruno H P Rosado - Universidade do Estado do Rio de Janeiro
Lucy Rowland - University of Exeter
Alexey V Rubtsov - Siberian Federal University
Santiago Sabaté - Centre for Research on Ecology and Forestry Applications
Yann Salmon - University of Helsinki
Roberto L Salomón - Universidad Politécnica de Madrid
Elisenda Sánchez-Costa - Institute for Research and Technology in Food and Agriculture
Karina V R Schäfer - Rutgers, The State University of New Jersey
Bernhard Schuldt - University of Würzburg
Alexandr Shashkin - Sukachev Institute of Forest
Clément Stahl - AgroParisTech
Marko Stojanović - Czech Academy of Sciences, Global Change Research Institute
Juan Carlos Suárez - University of the Amazon
Ge Sun - Southern Research Station
Justyna Szatniewska - Czech Academy of Sciences, Global Change Research Institute
Fyodor Tatarinov - Weizmann Institute of Science
Frank M Thomas - Universität Trier
Pantana Tor-Ngern - Chulalongkorn University
Josef Urban - Siberian Federal University
Fernando Valladares - Museo Nacional de Ciencias Naturales
Christiaan van Der Tol - University of Twente
Ilja van Meerveld - University of Zurich
Andrej Varlagin - Severtsov Institute of Ecology and Evolution
Holm Voigt - University of Bonn
Jeffrey Warren - Oak Ridge National Laboratory
Christiane Werner - University of Freiburg
Willy Werner - Universität Trier
Gerhard Wieser - Austrian Research Centre for Forests
Lisa Wingate - Interactions Sol Plante Atmosphère
Stan Wullschleger - Oak Ridge National Laboratory
Koong Yi - University of Virginia
Roman Zweifel - Swiss Federal Institute for Forest, Snow and Landscape Research
Kathy Steppe - Ghent University
Maurizio Mencuccini - Institució Catalana de Recerca i Estudis Avançats
Jordi Martínez-Vilalta - Universitat Autònoma de Barcelona
Publication Details: Earth System Science Data, Vol.13, pp.2607 - 2649
Identifiers: 9939876309311
Academic Unit: Centre d'Ecologie Fonctionnelle et Evolutive - CEFE; BotAnique et Modélisation de l'Architecture des Plantes et des végétations - AMAP
Language: English
Resource Type: Dataset
Local Fields: hal-03261880