Résumé
In this repository, we deposited support data for the article "An Atlas of Plant Transposable Elements", available at http://apte.cp.utfpr.edu.br/. Here, we included: 1.) Supplementary material data: A) SuppMat_1.xlsx: The genome assembly reference access from Ensembl Plants species used. B) SuppMat_2.docx: A brief transposable elements annotation steps used in this work. 2.) Code and software: all script code create, third part software, how we used it, are detailed using Arabidopsis thaliana genome as an example in the GitHub: https://github.com/daniellonghi/te_pipeline under the MIT license (please see details in licence.txt file). For third part-software, consult their terms. To report bugs, to ask for help, and to give any feedback, please contact Alexandre R. Paschoal (paschoal@utfpr.edu.br) or Douglas S. Domingues (douglas.domingues@unesp.br).