Common dolphin (Delphinus delphis) and other delphinid sdRAD-seq sequences, digested with the SbfI enzyme

Tamas Malkocs; Méndez-Fernandez Paula; Willy Dabin; Jeremy Kiszka; Paul Tixier; Pablo Covelo; Xabier Pin; Alfredo López; Andreia Torres-Pereira; Catarina Eira; Filipe Alves; Rita Ferreira; Emily Longequeue; Lapegue Sylvie; Amelia Viricel

doi:10.12770/e4be6a50-9b54-4b81-85de-f94c09fa9286

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Common dolphin (Delphinus delphis) and other delphinid sdRAD-seq sequences, digested with the SbfI enzyme

Tamas Malkocs, Méndez-Fernandez Paula, Willy Dabin, Jeremy Kiszka, Paul Tixier, Pablo Covelo, Xabier Pin, Alfredo López, Andreia Torres-Pereira, Catarina Eira, …

IFREMER

31/01/2025

DOI: https://doi.org/10.12770/e4be6a50-9b54-4b81-85de-f94c09fa9286

Résumé

Biological Environment/Bioinformatics

Habitats and biotopes

In order to better characterize the population structure of common dolphins (Delphinus delphis) in the Bay of Biscay, a single digest RADseq (SbfI enzyme) protocol was used to obtain paired-end, 150bp NGS sequences on the Illumina NovaSeq 6000 sequencing platform. D. delphis samples from the Western North Atlantic, and samples from three other delphinid species were included as outgroups.

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Détails

Titre: Common dolphin (Delphinus delphis) and other delphinid sdRAD-seq sequences, digested with the SbfI enzyme
Créateurs - sans rôle: Tamas Malkocs - Institut Universitaire Européen de la Mer
Méndez-Fernandez Paula - Observatoire Pelagis, UAR 3462 La Rochelle Université/CNRS, 17000 La Rochelle, France
Willy Dabin - Observatoire Pelagis, UAR 3462 La Rochelle Université/CNRS, 17000 La Rochelle, France
Jeremy Kiszka - Florida International University
Paul Tixier - MARBEC (Marine Biodiversity, Exploitation, and Conservation), UMR IRD/Ifremer/Université de Montpellier/CNRS, 34203 Sète cedex, France
Pablo Covelo - CEMMA (Coordinadora para o Estudo dos Mamiferos Mariños), PO Box 15, 36380 Gondomar (Pontevedra), Spain
Xabier Pin - CEMMA (Coordinadora para o Estudo dos Mamiferos Mariños), PO Box 15, 36380 Gondomar (Pontevedra), Spain
Alfredo López - CEMMA (Coordinadora para o Estudo dos Mamiferos Mariños), PO Box 15, 36380 Gondomar (Pontevedra), Spain & Department of Biology & CESAM & ECOMARE/CPRAM, Universidade de Aveiro, 3810-193 Aveiro, Portugal
Andreia Torres-Pereira - Department of Biology & CESAM & ECOMARE/CPRAM, Universidade de Aveiro, 3810-193 Aveiro, Portugal
Catarina Eira - Department of Biology & CESAM & ECOMARE/CPRAM, Universidade de Aveiro, 3810-193 Aveiro, Portugal
Filipe Alves - MARE – Marine and Environmental Sciences Centre, Regional Agency for the Development of Research (ARDITI), Funchal, Portugal & Faculty of Life Sciences, University of Madeira, Portugal
Rita Ferreira - MARE – Marine and Environmental Sciences Centre, Regional Agency for the Development of Research (ARDITI), Funchal, Portugal & Faculty of Life Sciences, University of Madeira, Portugal
Emily Longequeue - MGX-Montpellier GenomiX, Université de Montpellier, CNRS, INSERM, Montpellier, France
Lapegue Sylvie - MARBEC (Marine Biodiversity, Exploitation, and Conservation), UMR IRD/Ifremer/Université de Montpellier/CNRS, 34203 Sète cedex, France
Amelia Viricel - Institut Universitaire Européen de la Mer
Éditeur: IFREMER
Identifiants: 99157523109311
Unité académique: MARine Biodiversity, Exploitation & Conservation - MARBEC
Langue: English
Type de ressource: Dataset