BioTIME: A database of biodiversity time series for the Anthropocene

Maria Dornelas; Andrew Antão; Andrew Moyes; John Bates; Anne Magurran; Dušan Adam; Asem Akhmetzhanova; Ward Appeltans; José Arcos; Andrew Hale; Narayanan Ayyappan; Andrew Badihi; Andrew Baird; Andrew Barbosa; Tiago Egydio Barreto; Claus Bässler; Victor Bellgrove; Jon Belmaker; Lisandro Benedetti-Cecchi; Brian Bett; Anne Bjorkman; Magdalena Błażewicz; S. Blowes; Christopher Bloch; Timothy Bonebrake; Andrew Boyd; Matt Bradford; Andrew Brooks; James Brown; Helge Bruelheide; Phaedra Budy; Fernando Carvalho; Mia Castañeda-Moya; Allen Chen; John Chamblee; James Chase; John Siegwart Collier; Sharon Collinge; Richard Condit; Elisabeth Cooper; Hans Cornelissen; Unai Cotano; Kyle Kyle Crow; Gabriel Damasceno; Claire Davies; Robert Davis; Frank Frank; Steven Degraer; Victor Doherty; Con Dunn; Giselda Durigan; J. Emmett Duffy; Dor Edelist; Graham Edgar; Robin Elahi; Sara Elmendorf; Anders Enemar; Con Ernest; Con Escribano; Marc Estiarte; Con Evans; Tung-Yung Fan; Luiz Turini Farah; Luiz Loureiro Fernandes; Jan Farneda; Alessandra Fidelis; Robert Fitt; Maria Fosaa; Geraldo Antonio Daher Correa Franco; James Frank; William Fraser; Hernando García; Robert Cazzolla Gatti; Or Givan; Elizabeth Gorgone-Barbosa; William Gould; Corinna Gries; Gary Grossman; Julio Gutierréz; Stephen Hale; Mark Harmon; John Harte; Gary Haskins; Donald Henshaw; John Hermanutz; Con Hidalgo; Pedro Higuchi; Andrew Hoey; Gert van Hoey; Annika Hofgaard; Kristen Holeck; Robert Hollister; Richard Holmes; James Hoogenboom; Chih-Hao Hsieh; Stephen Hubbell; Falk Huettmann; Christine Huffard; Carolina Hurlbert; Natália Macedo Ivanauskas; Jan Janík; Jan Jandt; Anna Jażdżewska; Tore Johannessen; John Johnstone; Jon Jones; Andrew Jones; Andrew Kang; Con Kartawijaya; Erin Keeley; Con Kelt; Andrew Kinnear; Kari Klanderud; Halvor Knutsen; Christopher Koenig; Andrew Kortz; Kamil Král; Linda Kuhnz; James Kuo; David Kushner; Claire Laguionie-Marchais; Lesley Lancaster; Cheol Min Lee; Jon Lefcheck; Esther Lévesque; David Lightfoot; Francis Lloret; John Lloyd; Adrià López-Baucells; Maite Louzao; Joshua Madin; Borgþór Magnússon; Shahar Malamud; Andrew Matthews; Kent Mcfarland; Brian Mcgill; Diane Mcknight; Con Mclarney; Con Meador; Peter Meserve; Daniel Metcalfe; Christoph Sal; Anders Michelsen; Nataliya Milchakova; Tom Moens; Even Moland; Andrew W. Moore; Con Mathias Moreira; Jörg Müller; Grace Murphy; Isla Myers-Smith; Randall Myster; Andrew Naumov; Francis Neat; Nelson Nelson; Michael Paul Nelson; Stephen Newton; Natalia Norden; Jeffrey Oliver; Esben Olsen; Vladimir Onipchenko; Krzysztof Pabis; Robert Pabst; Alain Paquette; Con Pardede; Andrew D. Paterson; Raphaël Pelissier; Josep Peñuelas; Con Pérez-Matus; Oscar Pizarro; Francesco Pomati; Eric Post; Herbert Prins; John Priscu; Pieter Provoost; Kathleen Prudic; Erkki Pulliainen; B. Ramesh; Olivia Mendivil Ramos; Andrew Rassweiler; Jose Eduardo Rebelo; Daniel Reed; Peter Reich; Suzanne Remillard; Richard Richardson; Itai van Rijn; Ricardo Rocha; Victor Rivera-Monroy; Christian Rixen; Kevin Robinson; Ricardo Ribeiro Rodrigues; José de Cerqueira Rossa-Feres; Lars Rudstam; Henry Ruhl; Con Ruz; Eric Sampaio; Nancy Rybicki; Andrew Rypel; Sofia Sal; Beatriz Salgado; Flávio Roberto Santos; Ana Paula Savassi-Coutinho; Sara Scanga; Jochen Schmidt; Robert Schooley; Con Setiawan; Kwang-Tsao Shao; Gaius Woods; Sally Sherman; Thomas Sherry; Jacek Siciński; Caya Sievers; Ana Carolina da Silva; Carl Rodrigues da Silva; Fabio Silveira; Con Slingsby; Tracey Smart; Sara Snell; Con Soudzilovskaia; Jan Souza; Flaviana Maluf Souza; Vinícius Castro Souza; Christopher Stallings; Rowan Stanforth; Emily Stanley; José Mauro Sterza; Maarten Stevens; Rick Stuart-Smith; Yzel Rondon Suarez; Sara Supp; Jorge Yoshio Tamashiro; Con Tarigan; Gary Thiede; Simon Thorn; Anne Tolvanen; Maria Teresa Zugliani Toniato; Robert Twilley; Gediminas Vaitkus; Nelson Valdivia; Martha Isabel Vallejo; Thomas Valone; Carl van Colen; Jan Vanaverbeke; Fabio Venturoli; Hans Verheye; Marcelo Vianna; Rui Vieira; Tomáš Vrška; Con Quang Vu; Lien van Vu; Robert Waide; Conor Waldock; Dave Watts; Sara Webb; Tomasz Wesołowski; Ethan White; Claire Widdicombe; Dustin Wilgers; Richard Williams; Stefan Williams; Mark Williamson; Michael Willig; Trevor Willis; Sonja Wipf; Kerry Woods; Eric Woehler; Kyle Zawada; Michael Zettler

doi:10.1111/geb.12729

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BioTIME: A database of biodiversity time series for the Anthropocene

Dataset

Open access

Peer reviewed

BioTIME: A database of biodiversity time series for the Anthropocene

Maria Dornelas, Andrew Antão, Andrew Moyes, John Bates, Anne Magurran, Dušan Adam, Asem Akhmetzhanova, Ward Appeltans, José Arcos, Andrew Hale, …

Global Ecology and Biogeography, Vol.27(7), pp.760 - 786

2018

DOI: https://doi.org/10.1111/geb.12729

PMID: 30147447

Abstract

Turnover

Biodiversity

Global

Spatial

Species richness

Motivation: The BioTIME database contains raw data on species identities and abundances in ecological assemblages through time. These data enable users to calculate temporal trends in biodiversity within and amongst assemblages using a broad range of metrics. BioTIME is being developed as a community‐led open‐source database of biodiversity time series. Our goal is to accelerate and facilitate quantitative analysis of temporal patterns of biodiversity in the Anthropocene.Main types of variables included: The database contains 8,777,413 species abundance records, from assemblages consistently sampled for a minimum of 2 years, which need not necessarily be consecutive. In addition, the database contains metadata relating to sampling methodology and contextual information about each record.Spatial location and grain: BioTIME is a global database of 547,161 unique sampling locations spanning the marine, freshwater and terrestrial realms. Grain size varies across datasets from 0.0000000158 km2 (158 cm2) to 100 km2 (1,000,000,000,000 cm2).Time period and grain: BioTIME records span from 1874 to 2016. The minimal temporal grain across all datasets in BioTIME is a year.Major taxa and level of measurement: BioTIME includes data from 44,440 species across the plant and animal kingdoms, ranging from plants, plankton and terrestrial invertebrates to small and large vertebrates.

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Title: BioTIME: A database of biodiversity time series for the Anthropocene
Creators - without role: Maria Dornelas
Andrew Antão
Andrew Moyes
John Bates
Anne Magurran
Dušan Adam
Asem Akhmetzhanova
Ward Appeltans - International Oceanographic Data and Information Exchange (IODE)
José Arcos
Andrew Hale - Safety science group
Narayanan Ayyappan - Institut Français
Andrew Badihi
Andrew Baird
Andrew Barbosa
Tiago Egydio Barreto
Claus Bässler
Victor Bellgrove
Jon Belmaker
Lisandro Benedetti-Cecchi - Department of Biology [Pisa]
Brian Bett
Anne Bjorkman
Magdalena Błażewicz
S. Blowes
Christopher Bloch
Timothy Bonebrake
Andrew Boyd
Matt Bradford - CSIRO Land and Water
Andrew Brooks
James Brown
Helge Bruelheide - Institute of Biology/Geobotany and Botanical Garden
Phaedra Budy
Fernando Carvalho
Mia Castañeda-Moya
Allen Chen
John Chamblee
James Chase
John Siegwart Collier
Sharon Collinge
Richard Condit
Elisabeth Cooper
Hans Cornelissen
Unai Cotano
Kyle Kyle Crow
Gabriel Damasceno
Claire Davies
Robert Davis
Frank Frank
Steven Degraer - Management Unit of the Mathematical Model of the North Sea
Victor Doherty
Con Dunn
Giselda Durigan - Floresta Estadual Assis
J. Emmett Duffy
Dor Edelist
Graham Edgar
Robin Elahi
Sara Elmendorf
Anders Enemar
Con Ernest
Con Escribano
Marc Estiarte - Centre d'Estudis Avançats de Blanes
Con Evans
Tung-Yung Fan - National Museum of Marine Biology and Aquarium
Luiz Turini Farah
Luiz Loureiro Fernandes
Jan Farneda
Alessandra Fidelis - Universidade de São Paulo
Robert Fitt
Maria Fosaa
Geraldo Antonio Daher Correa Franco
James Frank
William Fraser - Polar
Hernando García
Robert Cazzolla Gatti
Or Givan - Department of Zoology
Elizabeth Gorgone-Barbosa
William Gould
Corinna Gries
Gary Grossman
Julio Gutierréz
Stephen Hale
Mark Harmon
John Harte
Gary Haskins
Donald Henshaw
John Hermanutz
Con Hidalgo
Pedro Higuchi
Andrew Hoey
Gert van Hoey
Annika Hofgaard - Norwegian Institute for Nature Research
Kristen Holeck
Robert Hollister
Richard Holmes
James Hoogenboom
Chih-Hao Hsieh
Stephen Hubbell
Falk Huettmann - EWHALE Laboratory of Biology and Wildlife Department
Christine Huffard
Carolina Hurlbert
Natália Macedo Ivanauskas
Jan Janík
Jan Jandt
Anna Jażdżewska - Polar
Tore Johannessen
John Johnstone
Jon Jones
Andrew Jones
Andrew Kang
Con Kartawijaya
Erin Keeley
Con Kelt
Andrew Kinnear
Kari Klanderud
Halvor Knutsen
Christopher Koenig
Andrew Kortz
Kamil Král
Linda Kuhnz
James Kuo
David Kushner
Claire Laguionie-Marchais
Lesley Lancaster - Dept Ecol Evol Biol, Univ California SC
Cheol Min Lee
Jon Lefcheck
Esther Lévesque - Département de chimie-biologie & Centre d’études nordiques [CANADA]
David Lightfoot
Francis Lloret
John Lloyd - Human Communication Technologies Research Laboratory
Adrià López-Baucells
Maite Louzao - Instituto Español de Oceanografía
Joshua Madin
Borgþór Magnússon
Shahar Malamud
Andrew Matthews
Kent Mcfarland
Brian Mcgill
Diane Mcknight
Con Mclarney
Con Meador
Peter Meserve
Daniel Metcalfe
Christoph Sal
Anders Michelsen - Department of Biology [Copenhagen]
Nataliya Milchakova
Tom Moens
Even Moland - Flødevigen Research Station
Andrew W. Moore - Computer Laboratory [Cambridge]
Con Mathias Moreira
Jörg Müller - Aarhus University
Grace Murphy
Isla Myers-Smith
Randall Myster
Andrew Naumov
Francis Neat
Nelson Nelson
Michael Paul Nelson
Stephen Newton
Natalia Norden - Evolution et Diversité Biologique
Jeffrey Oliver
Esben Olsen
Vladimir Onipchenko
Krzysztof Pabis
Robert Pabst
Alain Paquette - Forest Research
Con Pardede
Andrew D. Paterson - Genomics
Raphaël Pelissier - Université de Montpellier, BotAnique et Modélisation de l'Architecture des Plantes et des végétations - AMAP
Josep Peñuelas - Centre d'Estudis Avançats de Blanes
Con Pérez-Matus
Oscar Pizarro - Centro de Investigación Oceanográfica en el Pacífico Sur Oriental
Francesco Pomati
Eric Post - Department of Biology
Herbert Prins
John Priscu
Pieter Provoost
Kathleen Prudic
Erkki Pulliainen
B. Ramesh
Olivia Mendivil Ramos
Andrew Rassweiler - Department of Biological Science [Tallahassee]
Jose Eduardo Rebelo
Daniel Reed
Peter Reich - Department of Forest Resources
Suzanne Remillard
Richard Richardson
Itai van Rijn
Ricardo Rocha
Victor Rivera-Monroy
Christian Rixen - WSL Institute for Snow and Avalanche Research SLF
Kevin Robinson
Ricardo Ribeiro Rodrigues
José de Cerqueira Rossa-Feres
Lars Rudstam
Henry Ruhl
Con Ruz
Eric Sampaio
Nancy Rybicki
Andrew Rypel
Sofia Sal
Beatriz Salgado
Flávio Roberto Santos - Communication Systems Group [Zurich]
Ana Paula Savassi-Coutinho
Sara Scanga
Jochen Schmidt
Robert Schooley
Con Setiawan
Kwang-Tsao Shao - Academia Sinica
Gaius Woods
Sally Sherman
Thomas Sherry
Jacek Siciński - Polar
Caya Sievers
Ana Carolina da Silva
Carl Rodrigues da Silva
Fabio Silveira
Con Slingsby
Tracey Smart
Sara Snell
Con Soudzilovskaia
Jan Souza
Flaviana Maluf Souza
Vinícius Castro Souza
Christopher Stallings
Rowan Stanforth
Emily Stanley
José Mauro Sterza
Maarten Stevens
Rick Stuart-Smith
Yzel Rondon Suarez
Sara Supp
Jorge Yoshio Tamashiro
Con Tarigan
Gary Thiede
Simon Thorn
Anne Tolvanen
Maria Teresa Zugliani Toniato
Robert Twilley
Gediminas Vaitkus
Nelson Valdivia - Facultad Ciencias del Mar
Martha Isabel Vallejo
Thomas Valone
Carl van Colen
Jan Vanaverbeke - Marine Biology Section
Fabio Venturoli
Hans Verheye
Marcelo Vianna
Rui Vieira
Tomáš Vrška
Con Quang Vu
Lien van Vu
Robert Waide
Conor Waldock
Dave Watts
Sara Webb
Tomasz Wesołowski - Department of Avian Ecology
Ethan White
Claire Widdicombe - Plymouth Marine Laboratory
Dustin Wilgers
Richard Williams
Stefan Williams
Mark Williamson
Michael Willig
Trevor Willis
Sonja Wipf
Kerry Woods
Eric Woehler - Institute for Marine and Antarctic Studies
Kyle Zawada
Michael Zettler
Publication Details: Global Ecology and Biogeography, Vol.27(7), pp.760 - 786
Identifiers: 9939464609311
Academic Unit: BotAnique et Modélisation de l'Architecture des Plantes et des végétations - AMAP
Language: English
Resource Type: Dataset
Local Fields: hal-01883395