RNA-SequenLens for Visualizing RNA Secondary Structures

Florence Ying Wang; Arnaud Sallaberry; Mathieu Roche

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RNA-SequenLens for Visualizing RNA Secondary Structures

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Open Access

RNA-SequenLens for Visualizing RNA Secondary Structures

Florence Ying Wang, Arnaud Sallaberry et Mathieu Roche

BioVis 2015 - 5th Symposium on Biological Data Visualization (Dublin, Ireland, 10/07/2015–11/07/2015)

2015

Résumé

Visual Analytic

In this paper, we present RNA-SequenLens to facilitate the visualization and comparison of RNA secondary structures.With RNA-SequenLens, all possible base pairings of a RNA sequence can be visualized at the desired probability threshold. Different RNA secondary structures can be easily compared. The interactive demo is available at https://youtu.be/C6EDC8LZJXw

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Détails

Titre: RNA-SequenLens for Visualizing RNA Secondary Structures
Créateurs - sans rôle: Florence Ying Wang - ADVanced Analytics for data SciencE
Arnaud Sallaberry - Université Paul-Valéry Montpellier
Mathieu Roche - Territoires, Environnement, Télédétection et Information Spatiale
Colloque: BioVis 2015 - 5th Symposium on Biological Data Visualization (Dublin, Ireland, 10/07/2015–11/07/2015)
Note de subvention: Labex Numev
Identifiants: 99151744709311
Unité académique: Laboratoire d'Informatique de Robotique et de Microélectronique de Montpellier - LIRMM
Langue: English
Type de ressource: Conference proceeding
Champs locaux: lirmm-01184562